STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN6Calpain 6; Belongs to the peptidase C2 family. (641 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
 
 
 0.855
CAST
Calpastatin.
    
 0.717
ITSN2
Intersectin 2.
   
 
  0.616
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.614
LRRC17
Leucine rich repeat containing 17.
    
 
 0.583
MMP26
Matrix metallopeptidase 26.
   
  
 0.556
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
      
 0.555
OVGP1
Oviductal glycoprotein 1; Belongs to the glycosyl hydrolase 18 family.
      
 0.483
TXLNG
Taxilin gamma.
   
  
 0.478
CASP12
Caspase 12 (gene/pseudogene); Belongs to the peptidase C14A family.
   
 0.427
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.