Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRPPACDP-L-ribitol pyrophosphorylase A. (451 aa)    
Predicted Functional Partners:
FKTN
Uncharacterized protein.
     
 0.942
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.806
SFI1
SFI1 centrin binding protein.
    
 0.774
WDR90
WD repeat domain 90.
    
 0.689
NME8
NME/NM23 family member 8.
   
 
 0.688
B4GAT1
Beta-1,4-glucuronyltransferase 1.
      
 0.655
PCID2
PCI domain containing 2.
    
 
 0.650
RXYLT1
Ribitol xylosyltransferase 1.
  
   
 0.636
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.625
PARP1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 0.617
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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