Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C12orf40Chromosome 12 open reading frame 40. (640 aa)    
Predicted Functional Partners:
C9orf131
Chromosome 9 open reading frame 131.
      
 0.686
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.686
DYNLL2
Dynein light chain.
    
   0.644
SPATA16
Spermatogenesis associated 16.
      
 0.637
ZFAND4
Zinc finger AN1-type containing 4.
      
 0.634
TULP2
TUB like protein 2; Belongs to the TUB family.
      
 0.620
C9orf43
Chromosome 9 open reading frame 43.
      
 0.620
CATSPER1
Cation channel sperm associated 1.
      
 0.615
ESX1
ESX homeobox 1.
      
 0.610
ERICH4
Glutamate rich 4.
      
 0.606
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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