Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC10558157660S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.978
RPL34
Uncharacterized protein.
  
 0.970
RPL10
Ribosomal_L16 domain-containing protein.
  
 0.962
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.962
RPS28
Ribosomal protein S28.
   
 
 0.961
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.961
RPL8
Ribosomal protein L8.
  
 0.958
ENSCATP00000023569
Ribosomal_L2_C domain-containing protein.
  
 0.958
ENSCATP00000033507
Uncharacterized protein.
  
 0.957
RPL30
Ribosomal protein L30.
   
 0.956
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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