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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCATP00000001233RRM domain-containing protein. (118 aa)    
Predicted Functional Partners:
SRSF7
Serine and arginine rich splicing factor 7.
   
0.980
SRPK1
Protein kinase domain-containing protein.
    
 0.966
TRA2B
Transformer 2 beta homolog.
   
 0.966
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.962
SRSF3
Serine and arginine rich splicing factor 3.
   
0.959
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.927
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.915
TRA2A
Transformer 2 alpha homolog.
   
 0.915
EIF4A3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.901
ENSCATP00000033245
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.901
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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