STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCATP00000001233RRM domain-containing protein. (118 aa)    
Predicted Functional Partners:
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.990
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.986
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.981
TRA2B
Transformer 2 beta homolog.
   
 0.980
ALYREF
Aly/REF export factor.
   
 0.977
SRSF10
Serine and arginine rich splicing factor 10.
   
 0.958
SRSF2
Serine and arginine rich splicing factor 2.
   
 0.954
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 0.953
SRSF6
Serine and arginine rich splicing factor 6.
   
 0.948
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.936
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
Server load: low (24%) [HD]