Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SOX21SRY-box transcription factor 21. (278 aa)    
Predicted Functional Partners:
POU5F1
POU domain protein.
    
 0.710
NAIF1
Nuclear apoptosis inducing factor 1.
    
   0.643
CTNNB1
Catenin beta 1.
    
 0.597
POU3F3
POU domain protein.
  
 
 0.561
POU3F1
POU domain protein.
  
 
 0.526
UBE2I
Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.518
ENSCATP00000008104
Homeobox domain-containing protein.
    
 0.501
ENSCATP00000028238
Homeobox domain-containing protein.
    
 0.501
JUP
Junction plakoglobin.
    
 0.495
NKX2-2
NK2 homeobox 2.
   
 
 0.485
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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