Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC18Coiled-coil domain containing 18. (1454 aa)    
Predicted Functional Partners:
CCDC14
Coiled-coil domain containing 14.
   
 
 0.825
PRPF19
Pre-mRNA processing factor 19.
    
 
 0.666
PCNT
Pericentrin.
   
   0.664
CEP135
Centrosomal protein 135.
   
   0.638
DMRT2
Doublesex and mab-3 related transcription factor 2.
    
   0.626
CCDC13
Uncharacterized protein.
    
 
 0.536
PARPBP
PARP1 binding protein.
   
  
 0.511
AKAP9
A-kinase anchoring protein 9.
   
   0.468
SFXN4
Sideroflexin 4.
      
 0.466
LOC105580640
Uncharacterized protein.
    
 
 0.451
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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