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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTMR6Myotubularin related protein 6. (621 aa)    
Predicted Functional Partners:
MTMR9
Myotubularin related protein 9.
  
0.965
FIG4
FIG4 phosphoinositide 5-phosphatase.
   
 
 0.913
SACM1L
SAC1 like phosphatidylinositide phosphatase.
     
 0.913
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.909
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.885
INPP5F
Inositol polyphosphate-5-phosphatase F.
     
 0.885
INPP4B
Inositol polyphosphate-4-phosphatase type II B.
     
 0.874
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.820
INPP4A
Inositol polyphosphate-4-phosphatase type I A.
     
 0.786
PLCD3
Phosphoinositide phospholipase C.
     
 0.782
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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