Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCL28C-C motif chemokine. (127 aa)    
Predicted Functional Partners:
CCL5
C-C motif chemokine.
    
 0.993
CCL26
C-C motif chemokine.
    
 0.993
CCL11
C-C motif chemokine.
    
 0.992
CCL13
C-C motif chemokine.
    
 0.991
CCR10
C-C motif chemokine receptor 10; Belongs to the G-protein coupled receptor 1 family.
    
 0.974
CXCL13
C-X-C motif chemokine.
    
 0.951
CCL21
C-C motif chemokine ligand 21.
    
 0.941
CXCL12
C-X-C motif chemokine ligand 12; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.940
CXCL10
C-X-C motif chemokine.
    
 0.940
CXCL9
C-X-C motif chemokine ligand 9.
    
 0.937
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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