Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBXN4UBX domain protein 4. (508 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.994
UBXN6
UBX domain protein 6.
    
 0.994
UBXN1
UBX domain protein 1.
     
0.957
UBXN8
UBX domain protein 8.
   
 
 0.945
UBXN2A
UBX domain protein 2A.
    
 0.938
NSFL1C
NSFL1 cofactor.
    
 0.934
UBE4A
Ubiquitination factor E4A.
    
 
 0.905
SVIP
Small VCP interacting protein.
     
 0.904
IP6K1
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
   0.893
BCL11A
BAF chromatin remodeling complex subunit BCL11A.
    
   0.870
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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