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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105576630Ig-like domain-containing protein; Belongs to the MHC class I family. (403 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.
   
 0.927
TAPBP
TAP binding protein.
   
 0.833
CD8A
CD8a molecule.
    
 0.807
TRAC
T cell receptor alpha constant.
    
  0.784
LOC105578248
Uncharacterized protein.
    
 0.719
LOC105582733
Uncharacterized protein.
    
 0.719
KLRD1
Killer cell lectin like receptor D1.
    
 0.690
CALR
Calreticulin.
    
 0.576
ENSCATP00000019356
RPA_C domain-containing protein.
   
 0.575
RPA2
Replication protein A2.
   
 0.575
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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