Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NPATNuclear protein, coactivator of histone transcription. (1427 aa)    
Predicted Functional Partners:
HINFP
Histone H4 transcription factor.
    
 
 0.867
CRAMP1
Cramped chromatin regulator homolog 1.
    
 
 0.837
CCNE1
Cyclin E1; Belongs to the cyclin family.
    
 
 0.827
CDK2
Cyclin dependent kinase 2; Belongs to the protein kinase superfamily.
    
 0.798
ZNF219
Zinc finger protein 219.
    
  0.776
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.680
CCNE2
Cyclin E2; Belongs to the cyclin family.
    
 
 0.670
TRRAP
Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.660
CASP8AP2
Caspase 8 associated protein 2.
   
 
 0.632
ZNF536
Zinc finger protein 536.
    
  0.619
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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