Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TMEM38BTransmembrane protein 38B. (291 aa)    
Predicted Functional Partners:
SEMA6D
Semaphorin 6D; Belongs to the semaphorin family.
      
 0.687
GOLIM4
Golgi integral membrane protein 4.
      
 0.687
LRRTM2
Leucine rich repeat transmembrane neuronal 2.
    
   0.649
NGLY1
N-glycanase 1.
    
   0.648
FKBP10
Peptidylprolyl isomerase.
      
 0.596
MBTPS2
Membrane bound transcription factor peptidase, site 2.
      
 0.585
SEC24D
SEC24 homolog D, COPII coat complex component.
      
 0.509
PPIB
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      
 0.501
CRTAP
Uncharacterized protein.
      
 0.498
SLC25A16
Solute carrier family 25 member 16; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.498
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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