STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCUBE1Signal peptide, CUB domain and EGF like domain containing 1. (1018 aa)    
Predicted Functional Partners:
GCC2
GRIP and coiled-coil domain containing 2.
    
 0.710
MMP9
Matrix metallopeptidase 9.
   
 0.567
ARID4B
AT-rich interaction domain 4B.
    
 0.561
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
  
  
 
0.537
ELSPBP1
Epididymal sperm binding protein 1.
   
 0.513
TG
Thyroglobulin.
   
 0.498
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.410
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.410
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.