STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP23BMatrix metallopeptidase 23B. (390 aa)    
Predicted Functional Partners:
COL13A1
Collagen type XIII alpha 1 chain.
    
 0.588
PARD6A
Par-6 family cell polarity regulator alpha.
      
 0.562
PLA2G4A
Phospholipase A2.
     
 0.532
CDK13
Cyclin dependent kinase 13.
      
 0.485
LOC105594428
Protein kinase domain-containing protein.
      
 0.475
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.440
COL16A1
Collagen type XVI alpha 1 chain.
   
 0.421
COL6A1
Collagen type VI alpha 1 chain.
    
 0.400
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.