Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALS2CL | MICALL1 | ENSCATP00000032887 | ENSCATP00000004386 | ALS2 C-terminal like. | MICAL like 1. | 0.483 |
CAPZB | MICALL1 | ENSCATP00000016816 | ENSCATP00000004386 | F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. | MICAL like 1. | 0.535 |
CASK | GRIN1 | ENSCATP00000043335 | ENSCATP00000038912 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Glutamate ionotropic receptor NMDA type subunit 1. | 0.989 |
CASK | ITSN2 | ENSCATP00000043335 | ENSCATP00000005444 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Intersectin 2. | 0.596 |
CASK | MAGI3 | ENSCATP00000043335 | ENSCATP00000035992 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Membrane associated guanylate kinase, WW and PDZ domain containing 3. | 0.604 |
CASK | MICALL1 | ENSCATP00000043335 | ENSCATP00000004386 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | MICAL like 1. | 0.616 |
GAREM1 | MICALL1 | ENSCATP00000019299 | ENSCATP00000004386 | GRB2 associated regulator of MAPK1 subtype 1. | MICAL like 1. | 0.459 |
GAREM1 | MICALL2 | ENSCATP00000019299 | ENSCATP00000009217 | GRB2 associated regulator of MAPK1 subtype 1. | MICAL like 2. | 0.494 |
GRIN1 | CASK | ENSCATP00000038912 | ENSCATP00000043335 | Glutamate ionotropic receptor NMDA type subunit 1. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.989 |
GRIN1 | MAGI3 | ENSCATP00000038912 | ENSCATP00000035992 | Glutamate ionotropic receptor NMDA type subunit 1. | Membrane associated guanylate kinase, WW and PDZ domain containing 3. | 0.662 |
GRIN1 | MICALL1 | ENSCATP00000038912 | ENSCATP00000004386 | Glutamate ionotropic receptor NMDA type subunit 1. | MICAL like 1. | 0.463 |
ITSN2 | CASK | ENSCATP00000005444 | ENSCATP00000043335 | Intersectin 2. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.596 |
ITSN2 | MAGI3 | ENSCATP00000005444 | ENSCATP00000035992 | Intersectin 2. | Membrane associated guanylate kinase, WW and PDZ domain containing 3. | 0.712 |
ITSN2 | MICALL1 | ENSCATP00000005444 | ENSCATP00000004386 | Intersectin 2. | MICAL like 1. | 0.573 |
MAGI3 | CASK | ENSCATP00000035992 | ENSCATP00000043335 | Membrane associated guanylate kinase, WW and PDZ domain containing 3. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.604 |
MAGI3 | GRIN1 | ENSCATP00000035992 | ENSCATP00000038912 | Membrane associated guanylate kinase, WW and PDZ domain containing 3. | Glutamate ionotropic receptor NMDA type subunit 1. | 0.662 |
MAGI3 | ITSN2 | ENSCATP00000035992 | ENSCATP00000005444 | Membrane associated guanylate kinase, WW and PDZ domain containing 3. | Intersectin 2. | 0.712 |
MAGI3 | MICALL1 | ENSCATP00000035992 | ENSCATP00000004386 | Membrane associated guanylate kinase, WW and PDZ domain containing 3. | MICAL like 1. | 0.771 |
MICALL1 | ALS2CL | ENSCATP00000004386 | ENSCATP00000032887 | MICAL like 1. | ALS2 C-terminal like. | 0.483 |
MICALL1 | CAPZB | ENSCATP00000004386 | ENSCATP00000016816 | MICAL like 1. | F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. | 0.535 |
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