STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAFD1TRAF-type zinc finger domain containing 1. (582 aa)    
Predicted Functional Partners:
CHMP4A
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.751
TRAF7
TNF receptor associated factor 7.
   
 0.594
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.539
ITSN2
Intersectin 2.
   
 0.498
CHEK2
Checkpoint kinase 2.
    
 
 0.466
ENSCATP00000001061
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.462
LOC105581053
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.462
AGPAT1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.411
AGPAT2
1-acylglycerol-3-phosphate O-acyltransferase 2.
     
 0.411
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.409
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.