STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF13CTNF receptor superfamily member 13C. (157 aa)    
Predicted Functional Partners:
TNFSF13B
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
    
 0.999
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.991
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.962
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.919
TRAF1
TNF receptor-associated factor.
   
 0.856
CD79B
CD79b molecule.
   
  
 0.777
CD40LG
CD40 ligand, membrane form; Cytokine that acts as a ligand to CD40/TNFRSF5 (By similarity). Costimulates T-cell proliferation and cytokine production (By similarity). Its cross-linking on T-cells generates a costimulatory signal which enhances the production of IL4 and IL10 in conjunction with the TCR/CD3 ligation and CD28 costimulation (By similarity). Induces the activation of NF-kappa-B (By similarity). Induces the activation of kinases MAPK8 and PAK2 in T-cells (By similarity). Mediates B-cell proliferation in the absence of co-stimulus as well as IgE production in the presence of [...]
     
 0.753
LTBR
Lymphotoxin beta receptor.
   
 
 0.712
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
   
 
 0.692
CD40
CD40 molecule.
   
 
 0.688
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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