STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBDUbiquitin D. (165 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.984
UBXN7
UBX domain-containing protein 7.
    
 0.983
FANCM
FA complementation group M.
   
 0.955
UBA6
Ubiquitin like modifier activating enzyme 6.
   
 0.950
ENSCATP00000001061
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.944
LOC105581053
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.944
SCP2
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.942
RPS28
Ribosomal protein S28.
   
 0.926
TRAF7
TNF receptor associated factor 7.
    
 0.913
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.910
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.