Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPWD1Peptidylprolyl isomerase domain and WD repeat containing 1. (634 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
   
 0.976
DHX38
DEAH-box helicase 38.
   
 0.973
WDR70
WD repeat domain 70.
   
 0.971
CWC25
CWC25 spliceosome associated protein homolog.
    
 0.971
SLU7
SLU7 homolog, splicing factor.
    
 0.969
CWC22
CWC22 spliceosome associated protein homolog.
   
  0.967
CCDC12
Coiled-coil domain containing 12.
    
 0.965
CACTIN
Cactin, spliceosome C complex subunit.
    
  0.965
FAM32A
Family with sequence similarity 32 member A.
   
  0.965
MTREX
Mtr4 exosome RNA helicase.
   
 0.961
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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