STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD1L3Polycystin 1 like 3, transient receptor potential channel interacting. (1723 aa)    
Predicted Functional Partners:
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
    
0.989
PKD2
Polycystin 2, transient receptor potential cation channel.
    
0.930
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
    
0.877
MYOT
Myotilin.
    
 0.796
PKD1L2
Uncharacterized protein.
 
    
 0.691
TRPM5
Transient receptor potential cation channel subfamily M member 5.
      
 0.616
GPR4
G protein-coupled receptor 4; Belongs to the G-protein coupled receptor 1 family.
     
 0.614
GNA14
G protein subunit alpha 14.
      
 0.597
TMEM44
Transmembrane protein 44.
      
 0.591
CALHM2
Calcium homeostasis modulator family member 2.
      
 0.591
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.