Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPDR1Ependymin related 1. (227 aa)    
Predicted Functional Partners:
SQSTM1
Sequestosome 1.
    
 
 0.656
AOAH
Acyloxyacyl hydrolase.
      
 0.608
NHS
NHS actin remodeling regulator.
      
 0.583
TRMT9B
tRNA methyltransferase 9B (putative).
      
 0.573
NME8
NME/NM23 family member 8.
    
 
 0.555
ANLN
Anillin actin binding protein.
      
 0.552
CPD
Carboxypeptidase D.
      
 0.547
LONRF1
LON peptidase N-terminal domain and ring finger 1.
      
 0.512
C8orf48
Chromosome 8 open reading frame 48.
      
 0.509
GPR141
G protein-coupled receptor 141.
      
 0.509
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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