Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SYT13Synaptotagmin 13. (426 aa)    
Predicted Functional Partners:
ODF1
Outer dense fiber of sperm tails 1.
      
 0.621
SPATA20
Spermatogenesis-associated protein 20; May play a role in fertility regulation.
      
 0.616
SPATA18
Spermatogenesis associated 18.
      
 0.598
PTN
Pleiotrophin.
      
 0.596
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
    
 0.579
TSPAN8
Tetraspanin.
     
 0.568
KLF6
Kruppel like factor 6.
      
 0.568
SCNN1B
Sodium channel epithelial 1 beta subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.557
ITSN2
Intersectin 2.
     
 0.552
RRAD
GTP-binding protein; Belongs to the small GTPase superfamily. RGK family.
      
 0.545
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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