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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIB1Mindbomb E3 ubiquitin protein ligase 1. (1006 aa)    
Predicted Functional Partners:
ZMYM4
Zinc finger MYM-type containing 4.
   
  0.765
PCM1
Pericentriolar material 1.
    
 
 0.673
MRC2
Mannose receptor C type 2.
    
 
 0.559
NHS
NHS actin remodeling regulator.
   
 0.528
JAG1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 0.516
KIFC3
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.516
NEK4
NIMA related kinase 4.
    
 
 0.492
CYLD
CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family.
    
 0.472
IFT22
Intraflagellar transport 22.
    
 0.470
CASP9
Caspase 9; Belongs to the peptidase C14A family.
    
  0.467
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.