Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCATP00000010360Uncharacterized protein. (73 aa)    
Predicted Functional Partners:
EMD
Emerin.
    
 0.911
LMNA
Lamin A/C; Belongs to the intermediate filament family.
    
 0.801
VRK1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
    
 0.794
VRK2
VRK serine/threonine kinase 2.
    
 0.753
LEMD3
LEM domain containing 3.
    
 0.745
TMPO
Thymopoietin.
    
 0.743
SNRPD3
Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.
   
   0.695
LMNB2
Lamin B2; Belongs to the intermediate filament family.
    
 0.671
LMNB1
Lamin B1; Belongs to the intermediate filament family.
    
 0.671
BANF2
Barrier to autointegration factor 2.
  
 
   0.670
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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