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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTA1Vesicle trafficking 1. (231 aa)    
Predicted Functional Partners:
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.999
CHMP1A
Charged multivesicular body protein 1A.
    
 0.999
CHMP5
Charged multivesicular body protein 5.
   
 0.998
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.991
IST1
IST1 factor associated with ESCRT-III.
   
 
 0.949
GCH1
GTP cyclohydrolase 1.
   
   0.923
CHMP2A
Charged multivesicular body protein 2A.
    
 0.922
CHMP4C
Charged multivesicular body protein 4C.
    
 0.887
ENSCATP00000029662
Uncharacterized protein.
    
 0.835
CHMP4B
Charged multivesicular body protein 4B.
    
 0.835
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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