STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPHN1Oligophrenin 1. (802 aa)    
Predicted Functional Partners:
TMEM132E
Transmembrane protein 132E.
      
 0.591
MFSD12
Major facilitator superfamily domain containing 12.
      
 0.591
ARHGEF5
Rho guanine nucleotide exchange factor 5.
    
 
 0.567
FAM155B
Family with sequence similarity 155 member B.
      
 0.562
ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6.
      
 0.558
ZC4H2
Zinc finger C4H2-type containing.
      
 0.558
CNTN3
Contactin 3.
      
 0.556
OLFML2A
Olfactomedin like 2A.
      
 0.555
LAS1L
LAS1 like, ribosome biogenesis factor.
      
 0.555
OPCML
Opioid binding protein/cell adhesion molecule like.
     
 0.492
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.