CSMD2 protein (Cercocebus atys) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CSMD2

CUB and Sushi multiple domains 2. (3631 aa)

Predicted Functional Partners:

FAU

0.691

PDE1A

0.608

KLRD1

0.572

ERAP2

0.497

TNN

0.464

ENSCATP00000015804

0.464

TNR

0.464

TNC

0.464

LRRC41

0.455

BPIFB4

0.454

Your Current Organism:

Cercocebus atys

NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BPIFB4	CSMD2	ENSCATP00000001862	ENSCATP00000010885	BPI fold containing family B member 4.	CUB and Sushi multiple domains 2.	0.454
BPIFB4	FAU	ENSCATP00000001862	ENSCATP00000039454	BPI fold containing family B member 4.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.449
BPIFB4	KLRD1	ENSCATP00000001862	ENSCATP00000016579	BPI fold containing family B member 4.	Killer cell lectin like receptor D1.	0.579
CSMD2	BPIFB4	ENSCATP00000010885	ENSCATP00000001862	CUB and Sushi multiple domains 2.	BPI fold containing family B member 4.	0.454
CSMD2	ENSCATP00000015804	ENSCATP00000010885	ENSCATP00000015804	CUB and Sushi multiple domains 2.	Uncharacterized protein.	0.464
CSMD2	ERAP2	ENSCATP00000010885	ENSCATP00000020595	CUB and Sushi multiple domains 2.	Aminopeptidase.	0.497
CSMD2	FAU	ENSCATP00000010885	ENSCATP00000039454	CUB and Sushi multiple domains 2.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.691
CSMD2	KLRD1	ENSCATP00000010885	ENSCATP00000016579	CUB and Sushi multiple domains 2.	Killer cell lectin like receptor D1.	0.572
CSMD2	LRRC41	ENSCATP00000010885	ENSCATP00000032515	CUB and Sushi multiple domains 2.	Leucine rich repeat containing 41.	0.455
CSMD2	PDE1A	ENSCATP00000010885	ENSCATP00000024783	CUB and Sushi multiple domains 2.	Phosphodiesterase.	0.608
CSMD2	TNC	ENSCATP00000010885	ENSCATP00000035889	CUB and Sushi multiple domains 2.	Tenascin C.	0.464
CSMD2	TNN	ENSCATP00000010885	ENSCATP00000010458	CUB and Sushi multiple domains 2.	Tenascin N.	0.464
CSMD2	TNR	ENSCATP00000010885	ENSCATP00000026708	CUB and Sushi multiple domains 2.	Tenascin R.	0.464
ENSCATP00000015804	CSMD2	ENSCATP00000015804	ENSCATP00000010885	Uncharacterized protein.	CUB and Sushi multiple domains 2.	0.464
ENSCATP00000015804	KLRD1	ENSCATP00000015804	ENSCATP00000016579	Uncharacterized protein.	Killer cell lectin like receptor D1.	0.464
ENSCATP00000015804	TNC	ENSCATP00000015804	ENSCATP00000035889	Uncharacterized protein.	Tenascin C.	0.430
ENSCATP00000015804	TNN	ENSCATP00000015804	ENSCATP00000010458	Uncharacterized protein.	Tenascin N.	0.430
ENSCATP00000015804	TNR	ENSCATP00000015804	ENSCATP00000026708	Uncharacterized protein.	Tenascin R.	0.430
ERAP2	CSMD2	ENSCATP00000020595	ENSCATP00000010885	Aminopeptidase.	CUB and Sushi multiple domains 2.	0.497
ERAP2	FAU	ENSCATP00000020595	ENSCATP00000039454	Aminopeptidase.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.461