| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACAP1 | ACAP3 | ENSCATP00000010944 | ENSCATP00000021685 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | 0.657 |
| ACAP1 | AGFG2 | ENSCATP00000010944 | ENSCATP00000002097 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | ArfGAP with FG repeats 2. | 0.695 |
| ACAP1 | APPL1 | ENSCATP00000010944 | ENSCATP00000030727 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | 0.698 |
| ACAP1 | APPL2 | ENSCATP00000010944 | ENSCATP00000034066 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. | 0.649 |
| ACAP1 | ARF6 | ENSCATP00000010944 | ENSCATP00000002636 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | 0.628 |
| ACAP1 | PTPRCAP | ENSCATP00000010944 | ENSCATP00000037643 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | Protein tyrosine phosphatase receptor type C associated protein. | 0.784 |
| ACAP1 | RASAL3 | ENSCATP00000010944 | ENSCATP00000014460 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | RAS protein activator like 3. | 0.747 |
| ACAP1 | SKAP1 | ENSCATP00000010944 | ENSCATP00000043890 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | Src kinase associated phosphoprotein 1. | 0.723 |
| ACAP1 | VAV1 | ENSCATP00000010944 | ENSCATP00000018444 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | Vav guanine nucleotide exchange factor 1. | 0.706 |
| ACAP1 | ZAP70 | ENSCATP00000010944 | ENSCATP00000030319 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | Tyrosine-protein kinase. | 0.627 |
| ACAP3 | ACAP1 | ENSCATP00000021685 | ENSCATP00000010944 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | 0.657 |
| ACAP3 | AGFG2 | ENSCATP00000021685 | ENSCATP00000002097 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | ArfGAP with FG repeats 2. | 0.498 |
| ACAP3 | APPL1 | ENSCATP00000021685 | ENSCATP00000030727 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | 0.649 |
| ACAP3 | APPL2 | ENSCATP00000021685 | ENSCATP00000034066 | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. | 0.649 |
| AGFG2 | ACAP1 | ENSCATP00000002097 | ENSCATP00000010944 | ArfGAP with FG repeats 2. | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | 0.695 |
| AGFG2 | ACAP3 | ENSCATP00000002097 | ENSCATP00000021685 | ArfGAP with FG repeats 2. | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | 0.498 |
| APPL1 | ACAP1 | ENSCATP00000030727 | ENSCATP00000010944 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. | 0.698 |
| APPL1 | ACAP3 | ENSCATP00000030727 | ENSCATP00000021685 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | ArfGAP with coiled-coil, ankyrin repeat and PH domains 3. | 0.649 |
| APPL1 | APPL2 | ENSCATP00000030727 | ENSCATP00000034066 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2. | 0.912 |
| APPL1 | ARF6 | ENSCATP00000030727 | ENSCATP00000002636 | Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1. | ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. | 0.412 |