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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH19Protocadherin 19. (1148 aa)    
Predicted Functional Partners:
GAMT
Guanidinoacetate N-methyltransferase.
   
  
 0.575
DOLK
Dolichol kinase.
      
 0.558
LRRC4
Leucine rich repeat containing 4.
     
 0.558
MED12L
Mediator complex subunit 12L.
      
 0.557
CDH2
Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.
    
0.501
SCN1A
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
      
 0.485
SH3RF2
SH3 domain containing ring finger 2.
      
 0.485
KCNQ2
Potassium voltage-gated channel subfamily Q member 2; Belongs to the potassium channel family.
    
 
 0.481
CDKL5
Cyclin dependent kinase like 5.
      
 0.480
STXBP1
Syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.477
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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