Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC105572214 | MARF1 | ENSCATP00000013252 | ENSCATP00000041409 | Uncharacterized protein. | Meiosis regulator and mRNA stability factor 1. | 0.454 |
LOC105572214 | NCLN | ENSCATP00000013252 | ENSCATP00000044373 | Uncharacterized protein. | Nicalin. | 0.809 |
LOC105572214 | RRN3 | ENSCATP00000013252 | ENSCATP00000030043 | Uncharacterized protein. | RRN3 homolog, RNA polymerase I transcription factor. | 0.430 |
LOC105572214 | TMEM147 | ENSCATP00000013252 | ENSCATP00000041300 | Uncharacterized protein. | Transmembrane protein 147. | 0.555 |
MARF1 | LOC105572214 | ENSCATP00000041409 | ENSCATP00000013252 | Meiosis regulator and mRNA stability factor 1. | Uncharacterized protein. | 0.454 |
MARF1 | RRN3 | ENSCATP00000041409 | ENSCATP00000030043 | Meiosis regulator and mRNA stability factor 1. | RRN3 homolog, RNA polymerase I transcription factor. | 0.455 |
NCLN | LOC105572214 | ENSCATP00000044373 | ENSCATP00000013252 | Nicalin. | Uncharacterized protein. | 0.809 |
NCLN | TMEM147 | ENSCATP00000044373 | ENSCATP00000041300 | Nicalin. | Transmembrane protein 147. | 0.911 |
RRN3 | LOC105572214 | ENSCATP00000030043 | ENSCATP00000013252 | RRN3 homolog, RNA polymerase I transcription factor. | Uncharacterized protein. | 0.430 |
RRN3 | MARF1 | ENSCATP00000030043 | ENSCATP00000041409 | RRN3 homolog, RNA polymerase I transcription factor. | Meiosis regulator and mRNA stability factor 1. | 0.455 |
TMEM147 | LOC105572214 | ENSCATP00000041300 | ENSCATP00000013252 | Transmembrane protein 147. | Uncharacterized protein. | 0.555 |
TMEM147 | NCLN | ENSCATP00000041300 | ENSCATP00000044373 | Transmembrane protein 147. | Nicalin. | 0.911 |