Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BCL2L2-PABPN1 | LOC105591370 | ENSCATP00000030790 | ENSCATP00000006459 | BCL2L2-PABPN1 readthrough. | RRM domain-containing protein. | 0.688 |
| BCL2L2-PABPN1 | NCBP1 | ENSCATP00000030790 | ENSCATP00000002509 | BCL2L2-PABPN1 readthrough. | Nuclear cap binding protein subunit 1. | 0.963 |
| BCL2L2-PABPN1 | NCBP2 | ENSCATP00000030790 | ENSCATP00000011607 | BCL2L2-PABPN1 readthrough. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.976 |
| BCL2L2-PABPN1 | PABPN1L | ENSCATP00000030790 | ENSCATP00000013975 | BCL2L2-PABPN1 readthrough. | Poly(A) binding protein nuclear 1 like, cytoplasmic. | 0.792 |
| BCL2L2-PABPN1 | SRSF2 | ENSCATP00000030790 | ENSCATP00000019715 | BCL2L2-PABPN1 readthrough. | Serine and arginine rich splicing factor 2. | 0.623 |
| BCL2L2-PABPN1 | SRSF8 | ENSCATP00000030790 | ENSCATP00000005637 | BCL2L2-PABPN1 readthrough. | Serine and arginine rich splicing factor 8. | 0.684 |
| BCL2L2-PABPN1 | TIA1 | ENSCATP00000030790 | ENSCATP00000037522 | BCL2L2-PABPN1 readthrough. | TIA1 cytotoxic granule associated RNA binding protein. | 0.648 |
| BCL2L2-PABPN1 | TRA2A | ENSCATP00000030790 | ENSCATP00000036900 | BCL2L2-PABPN1 readthrough. | Transformer 2 alpha homolog. | 0.414 |
| FAU | PABPN1L | ENSCATP00000039454 | ENSCATP00000013975 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Poly(A) binding protein nuclear 1 like, cytoplasmic. | 0.671 |
| FAU | TRA2A | ENSCATP00000039454 | ENSCATP00000036900 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Transformer 2 alpha homolog. | 0.671 |
| LOC105591370 | BCL2L2-PABPN1 | ENSCATP00000006459 | ENSCATP00000030790 | RRM domain-containing protein. | BCL2L2-PABPN1 readthrough. | 0.688 |
| LOC105591370 | NCBP1 | ENSCATP00000006459 | ENSCATP00000002509 | RRM domain-containing protein. | Nuclear cap binding protein subunit 1. | 0.637 |
| LOC105591370 | NCBP2 | ENSCATP00000006459 | ENSCATP00000011607 | RRM domain-containing protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.634 |
| LOC105591370 | PABPN1L | ENSCATP00000006459 | ENSCATP00000013975 | RRM domain-containing protein. | Poly(A) binding protein nuclear 1 like, cytoplasmic. | 0.461 |
| LOC105591370 | TIA1 | ENSCATP00000006459 | ENSCATP00000037522 | RRM domain-containing protein. | TIA1 cytotoxic granule associated RNA binding protein. | 0.595 |
| LOC105591370 | TRA2A | ENSCATP00000006459 | ENSCATP00000036900 | RRM domain-containing protein. | Transformer 2 alpha homolog. | 0.785 |
| NCBP1 | BCL2L2-PABPN1 | ENSCATP00000002509 | ENSCATP00000030790 | Nuclear cap binding protein subunit 1. | BCL2L2-PABPN1 readthrough. | 0.963 |
| NCBP1 | LOC105591370 | ENSCATP00000002509 | ENSCATP00000006459 | Nuclear cap binding protein subunit 1. | RRM domain-containing protein. | 0.637 |
| NCBP1 | NCBP2 | ENSCATP00000002509 | ENSCATP00000011607 | Nuclear cap binding protein subunit 1. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.999 |
| NCBP1 | PABPN1L | ENSCATP00000002509 | ENSCATP00000013975 | Nuclear cap binding protein subunit 1. | Poly(A) binding protein nuclear 1 like, cytoplasmic. | 0.484 |
page 1 of 4