STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM38RNA binding motif protein 38. (237 aa)    
Predicted Functional Partners:
RBFOX1
RNA binding fox-1 homolog 1.
  
 
 0.786
RBFOX2
RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.
  
 
0.750
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
  
 
 
 0.591
ESRP2
Epithelial splicing regulatory protein 2.
      
 0.556
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
  
   
 0.551
TRA2A
Transformer 2 alpha homolog.
  
   
 0.504
LOC105591370
RRM domain-containing protein.
  
   
 0.482
SF3B4
Splicing factor 3b subunit 4.
  
  
 0.471
SRSF8
Serine and arginine rich splicing factor 8.
  
   
 0.469
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
  
   
 0.460
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.