Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCATP00000043289 | LSM8 | ENSCATP00000043289 | ENSCATP00000045912 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.666 |
ENSCATP00000043289 | MFAP1 | ENSCATP00000043289 | ENSCATP00000011068 | Uncharacterized protein. | Microfibril associated protein 1. | 0.960 |
ENSCATP00000043289 | PRPF8 | ENSCATP00000043289 | ENSCATP00000030901 | Uncharacterized protein. | Pre-mRNA processing factor 8. | 0.858 |
ENSCATP00000043289 | SART1 | ENSCATP00000043289 | ENSCATP00000018285 | Uncharacterized protein. | Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. | 0.746 |
ENSCATP00000043289 | SF3B5 | ENSCATP00000043289 | ENSCATP00000002338 | Uncharacterized protein. | Splicing factor 3B subunit 5; Belongs to the SF3B5 family. | 0.600 |
ENSCATP00000043289 | TXNL4A | ENSCATP00000043289 | ENSCATP00000033471 | Uncharacterized protein. | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | 0.828 |
ENSCATP00000043289 | UBL5 | ENSCATP00000043289 | ENSCATP00000019528 | Uncharacterized protein. | Ubiquitin like 5. | 0.932 |
ENSCATP00000043289 | WBP11 | ENSCATP00000043289 | ENSCATP00000016124 | Uncharacterized protein. | WW domain binding protein 11. | 0.823 |
ENSCATP00000043289 | ZMAT2 | ENSCATP00000043289 | ENSCATP00000017934 | Uncharacterized protein. | Zinc finger matrin-type 2. | 0.947 |
LSM8 | ENSCATP00000043289 | ENSCATP00000045912 | ENSCATP00000043289 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.666 |
LSM8 | MFAP1 | ENSCATP00000045912 | ENSCATP00000011068 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Microfibril associated protein 1. | 0.821 |
LSM8 | PRPF38A | ENSCATP00000045912 | ENSCATP00000016755 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA processing factor 38A. | 0.777 |
LSM8 | PRPF8 | ENSCATP00000045912 | ENSCATP00000030901 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA processing factor 8. | 0.985 |
LSM8 | SART1 | ENSCATP00000045912 | ENSCATP00000018285 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. | 0.975 |
LSM8 | SF3B5 | ENSCATP00000045912 | ENSCATP00000002338 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Splicing factor 3B subunit 5; Belongs to the SF3B5 family. | 0.974 |
LSM8 | TXNL4A | ENSCATP00000045912 | ENSCATP00000033471 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. | 0.938 |
LSM8 | UBL5 | ENSCATP00000045912 | ENSCATP00000019528 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Ubiquitin like 5. | 0.918 |
LSM8 | WBP11 | ENSCATP00000045912 | ENSCATP00000016124 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | WW domain binding protein 11. | 0.766 |
LSM8 | ZMAT2 | ENSCATP00000045912 | ENSCATP00000017934 | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | Zinc finger matrin-type 2. | 0.940 |
MFAP1 | ENSCATP00000043289 | ENSCATP00000011068 | ENSCATP00000043289 | Microfibril associated protein 1. | Uncharacterized protein. | 0.960 |
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