STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (730 aa)    
Predicted Functional Partners:
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.986
HNRNPK
Uncharacterized protein.
   
 0.969
ENSCATP00000000427
Uncharacterized protein.
   
 0.956
HNRNPA1
Uncharacterized protein.
   
 0.956
ZNF207
Zinc finger protein 207.
   
   0.933
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.927
RBMX
RNA binding motif protein X-linked.
   
 0.926
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.919
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.914
SNRPD3
Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.
   
 0.909
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.