Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATR | ENSCATP00000009666 | ENSCATP00000021242 | ENSCATP00000009666 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Uncharacterized protein. | 0.903 |
ATR | ENSCATP00000036401 | ENSCATP00000021242 | ENSCATP00000036401 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.973 |
ATR | EXO1 | ENSCATP00000021242 | ENSCATP00000001427 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Exonuclease 1. | 0.941 |
ATR | FANCM | ENSCATP00000021242 | ENSCATP00000014720 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | FA complementation group M. | 0.989 |
ATR | FEN1 | ENSCATP00000021242 | ENSCATP00000001446 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.770 |
ATR | MEIOB | ENSCATP00000021242 | ENSCATP00000003686 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Meiosis specific with OB-fold. | 0.949 |
ATR | PCNA | ENSCATP00000021242 | ENSCATP00000013469 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.739 |
ATR | RPA3 | ENSCATP00000021242 | ENSCATP00000009245 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Replication protein A3. | 0.629 |
ATR | TOP3A | ENSCATP00000021242 | ENSCATP00000043816 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.789 |
ATR | WRN | ENSCATP00000021242 | ENSCATP00000035398 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | WRN RecQ like helicase. | 0.997 |
ENSCATP00000009666 | ATR | ENSCATP00000009666 | ENSCATP00000021242 | Uncharacterized protein. | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | 0.903 |
ENSCATP00000009666 | ENSCATP00000036401 | ENSCATP00000009666 | ENSCATP00000036401 | Uncharacterized protein. | Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.954 |
ENSCATP00000009666 | EXO1 | ENSCATP00000009666 | ENSCATP00000001427 | Uncharacterized protein. | Exonuclease 1. | 0.811 |
ENSCATP00000009666 | FANCM | ENSCATP00000009666 | ENSCATP00000014720 | Uncharacterized protein. | FA complementation group M. | 0.950 |
ENSCATP00000009666 | FEN1 | ENSCATP00000009666 | ENSCATP00000001446 | Uncharacterized protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.885 |
ENSCATP00000009666 | MEIOB | ENSCATP00000009666 | ENSCATP00000003686 | Uncharacterized protein. | Meiosis specific with OB-fold. | 0.915 |
ENSCATP00000009666 | PCNA | ENSCATP00000009666 | ENSCATP00000013469 | Uncharacterized protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.712 |
ENSCATP00000009666 | RPA3 | ENSCATP00000009666 | ENSCATP00000009245 | Uncharacterized protein. | Replication protein A3. | 0.922 |
ENSCATP00000009666 | TOP3A | ENSCATP00000009666 | ENSCATP00000043816 | Uncharacterized protein. | DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. | 0.766 |
ENSCATP00000009666 | WRN | ENSCATP00000009666 | ENSCATP00000035398 | Uncharacterized protein. | WRN RecQ like helicase. | 0.995 |
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