Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APP | BACE1 | ENSCATP00000039839 | ENSCATP00000016163 | Amyloid beta precursor protein. | Beta-secretase 1; Belongs to the peptidase A1 family. | 0.954 |
APP | BACE2 | ENSCATP00000039839 | ENSCATP00000039663 | Amyloid beta precursor protein. | Beta-secretase 2; Belongs to the peptidase A1 family. | 0.843 |
APP | FYN | ENSCATP00000039839 | ENSCATP00000023367 | Amyloid beta precursor protein. | Tyrosine-protein kinase. | 0.423 |
BACE1 | APP | ENSCATP00000016163 | ENSCATP00000039839 | Beta-secretase 1; Belongs to the peptidase A1 family. | Amyloid beta precursor protein. | 0.954 |
BACE1 | BACE2 | ENSCATP00000016163 | ENSCATP00000039663 | Beta-secretase 1; Belongs to the peptidase A1 family. | Beta-secretase 2; Belongs to the peptidase A1 family. | 0.894 |
BACE1 | FYN | ENSCATP00000016163 | ENSCATP00000023367 | Beta-secretase 1; Belongs to the peptidase A1 family. | Tyrosine-protein kinase. | 0.410 |
BACE1 | GGA1 | ENSCATP00000016163 | ENSCATP00000029963 | Beta-secretase 1; Belongs to the peptidase A1 family. | Golgi associated, gamma adaptin ear containing, ARF binding protein 1. | 0.980 |
BACE1 | GGA2 | ENSCATP00000016163 | ENSCATP00000005266 | Beta-secretase 1; Belongs to the peptidase A1 family. | Golgi associated, gamma adaptin ear containing, ARF binding protein 2. | 0.755 |
BACE1 | RTN3 | ENSCATP00000016163 | ENSCATP00000030604 | Beta-secretase 1; Belongs to the peptidase A1 family. | Reticulon. | 0.949 |
BACE1 | RTN4 | ENSCATP00000016163 | ENSCATP00000036016 | Beta-secretase 1; Belongs to the peptidase A1 family. | Reticulon. | 0.950 |
BACE2 | APP | ENSCATP00000039663 | ENSCATP00000039839 | Beta-secretase 2; Belongs to the peptidase A1 family. | Amyloid beta precursor protein. | 0.843 |
BACE2 | BACE1 | ENSCATP00000039663 | ENSCATP00000016163 | Beta-secretase 2; Belongs to the peptidase A1 family. | Beta-secretase 1; Belongs to the peptidase A1 family. | 0.894 |
BACE2 | CADPS2 | ENSCATP00000039663 | ENSCATP00000005820 | Beta-secretase 2; Belongs to the peptidase A1 family. | Calcium dependent secretion activator 2. | 0.560 |
BACE2 | CAPN13 | ENSCATP00000039663 | ENSCATP00000029120 | Beta-secretase 2; Belongs to the peptidase A1 family. | Calpain 13; Belongs to the peptidase C2 family. | 0.614 |
BACE2 | FYN | ENSCATP00000039663 | ENSCATP00000023367 | Beta-secretase 2; Belongs to the peptidase A1 family. | Tyrosine-protein kinase. | 0.847 |
BACE2 | GGA1 | ENSCATP00000039663 | ENSCATP00000029963 | Beta-secretase 2; Belongs to the peptidase A1 family. | Golgi associated, gamma adaptin ear containing, ARF binding protein 1. | 0.754 |
BACE2 | GGA2 | ENSCATP00000039663 | ENSCATP00000005266 | Beta-secretase 2; Belongs to the peptidase A1 family. | Golgi associated, gamma adaptin ear containing, ARF binding protein 2. | 0.731 |
BACE2 | RTN3 | ENSCATP00000039663 | ENSCATP00000030604 | Beta-secretase 2; Belongs to the peptidase A1 family. | Reticulon. | 0.927 |
BACE2 | RTN4 | ENSCATP00000039663 | ENSCATP00000036016 | Beta-secretase 2; Belongs to the peptidase A1 family. | Reticulon. | 0.923 |
BACE2 | SRMS | ENSCATP00000039663 | ENSCATP00000028056 | Beta-secretase 2; Belongs to the peptidase A1 family. | Tyrosine-protein kinase. | 0.542 |
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