Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHD1L | ESRRG | ENSCATP00000014130 | ENSCATP00000043767 | Chromodomain helicase DNA binding protein 1 like. | Estrogen related receptor gamma. | 0.537 |
ESRRA | ESRRG | ENSCATP00000009201 | ENSCATP00000043767 | Estrogen related receptor alpha. | Estrogen related receptor gamma. | 0.771 |
ESRRA | MED1 | ENSCATP00000009201 | ENSCATP00000015815 | Estrogen related receptor alpha. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.528 |
ESRRA | NCOA1 | ENSCATP00000009201 | ENSCATP00000025009 | Estrogen related receptor alpha. | Nuclear receptor coactivator. | 0.469 |
ESRRA | NCOR1 | ENSCATP00000009201 | ENSCATP00000017629 | Estrogen related receptor alpha. | Nuclear receptor corepressor 1. | 0.684 |
ESRRA | NCOR2 | ENSCATP00000009201 | ENSCATP00000039231 | Estrogen related receptor alpha. | Nuclear receptor corepressor 2. | 0.649 |
ESRRA | NR0B1 | ENSCATP00000009201 | ENSCATP00000005180 | Estrogen related receptor alpha. | Nuclear receptor subfamily 0 group B member 1. | 0.427 |
ESRRA | NRIP1 | ENSCATP00000009201 | ENSCATP00000004776 | Estrogen related receptor alpha. | Nuclear receptor interacting protein 1. | 0.756 |
ESRRA | PPARGC1A | ENSCATP00000009201 | ENSCATP00000017431 | Estrogen related receptor alpha. | PPARG coactivator 1 alpha. | 0.974 |
ESRRA | PPARGC1B | ENSCATP00000009201 | ENSCATP00000012486 | Estrogen related receptor alpha. | PPARG coactivator 1 beta. | 0.818 |
ESRRG | CHD1L | ENSCATP00000043767 | ENSCATP00000014130 | Estrogen related receptor gamma. | Chromodomain helicase DNA binding protein 1 like. | 0.537 |
ESRRG | ESRRA | ENSCATP00000043767 | ENSCATP00000009201 | Estrogen related receptor gamma. | Estrogen related receptor alpha. | 0.771 |
ESRRG | MED1 | ENSCATP00000043767 | ENSCATP00000015815 | Estrogen related receptor gamma. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.528 |
ESRRG | NCOA1 | ENSCATP00000043767 | ENSCATP00000025009 | Estrogen related receptor gamma. | Nuclear receptor coactivator. | 0.863 |
ESRRG | NCOR1 | ENSCATP00000043767 | ENSCATP00000017629 | Estrogen related receptor gamma. | Nuclear receptor corepressor 1. | 0.648 |
ESRRG | NCOR2 | ENSCATP00000043767 | ENSCATP00000039231 | Estrogen related receptor gamma. | Nuclear receptor corepressor 2. | 0.894 |
ESRRG | NR0B1 | ENSCATP00000043767 | ENSCATP00000005180 | Estrogen related receptor gamma. | Nuclear receptor subfamily 0 group B member 1. | 0.586 |
ESRRG | NRIP1 | ENSCATP00000043767 | ENSCATP00000004776 | Estrogen related receptor gamma. | Nuclear receptor interacting protein 1. | 0.862 |
ESRRG | PPARGC1A | ENSCATP00000043767 | ENSCATP00000017431 | Estrogen related receptor gamma. | PPARG coactivator 1 alpha. | 0.881 |
ESRRG | PPARGC1B | ENSCATP00000043767 | ENSCATP00000012486 | Estrogen related receptor gamma. | PPARG coactivator 1 beta. | 0.694 |
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