STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SVEN_0624Xylose repressor XylR. (435 aa)    
Predicted Functional Partners:
SVEN_4059
PTS system, N-acetylmuramic acid-specific IIB component or PTS system, N-acetylmuramic acid-specific IIC component.
  
 
 0.923
SVEN_0625
Putative secreted sugar binding protein.
 
    0.672
SVEN_0626
Maltose or maltodextrin ABC transporter, permease protein MalF.
 
   
 0.654
SVEN_0627
Maltose or maltodextrin ABC transporter, permease protein MalG.
       0.580
SVEN_0628
Beta-galactosidase.
  
  
 0.557
SVEN_3052
PTS system, fructose-specific IIA component or PTS system, fructose-specific IIB component or PTS system,fructose-specific IIC component.
  
  
 0.459
Your Current Organism:
Streptomyces venezuelae
NCBI taxonomy Id: 953739
Other names: S. venezuelae ATCC 10712, Streptomyces venezuelae ATCC 10712, Streptomyces venezuelae ISP 5230, Streptomyces venezuelae str. ATCC 10712, Streptomyces venezuelae strain ATCC 10712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.