STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SVEN_3781Putative glycosyl transferase. (64 aa)    
Predicted Functional Partners:
SVEN_3775
Putative integral membrane protein.
 
  
 0.801
SVEN_5187
Sensory box or GGDEF family protein.
  
  
 0.584
SVEN_5396
Two-component hybrid sensor and regulator.
  
 
 0.567
SVEN_3773
Two-component system, sensor protein.
 
   0.547
SVEN_3782
Transcriptional regulator, TetR family.
       0.526
SVEN_7035
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.514
SVEN_0049
Hypothetical protein.
  
    0.431
SVEN_3783
Probable oxidoreductase or Short-chain dehydrogenase.
   
   0.428
SVEN_1426
Hypothetical protein.
 
 
 0.411
Your Current Organism:
Streptomyces venezuelae
NCBI taxonomy Id: 953739
Other names: S. venezuelae ATCC 10712, Streptomyces venezuelae ATCC 10712, Streptomyces venezuelae ISP 5230, Streptomyces venezuelae str. ATCC 10712, Streptomyces venezuelae strain ATCC 10712
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.