STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SVEN_6599Putative cellulose 1,4-beta-cellobiosidase. (970 aa)    
Predicted Functional Partners:
SVEN_6595
Chitinase; Belongs to the glycosyl hydrolase family 6.
   
 0.934
SVEN_6554
Hypothetical protein.
 
 0.789
SVEN_7361
Hydrolase.
 
 0.764
SVEN_6905
Endo-1,4-beta-xylanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.760
SVEN_6597
Endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
     0.737
SVEN_6731
Endo-1,4-beta-xylanase A precursor.
 
   
 0.697
SVEN_6744
Alpha-L-arabinofuranosidase II precursor.
  
   
 0.685
SVEN_6618
Putative secreted pectate lyase.
  
   
 0.681
SVEN_2582
Putative endo-1,4-beta-glucanase.
 
   
0.665
SVEN_7080
Endo-1,4-beta-xylanase A precursor.
  
   
 0.630
Your Current Organism:
Streptomyces venezuelae
NCBI taxonomy Id: 953739
Other names: S. venezuelae ATCC 10712, Streptomyces venezuelae ATCC 10712, Streptomyces venezuelae ISP 5230, Streptomyces venezuelae str. ATCC 10712, Streptomyces venezuelae strain ATCC 10712
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