Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SOX5SRY-box transcription factor 5. (763 aa)    
Predicted Functional Partners:
SOX6
SRY-box transcription factor 6.
   
 
 0.967
SOX13
SRY-box transcription factor 13.
    
 
 0.835
SOX11
Transcription factor SOX.
   
 0.826
CEP85
Centrosomal protein 85.
    
   0.809
COL2A1
Collagen type II alpha 1 chain.
    
 
 0.714
ATP2A2
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
      
 0.682
TRIP12
Thyroid hormone receptor interactor 12.
    
 
 0.641
ZBTB20
Zinc finger and BTB domain containing 20.
    
 
 0.641
MMP16
Matrix metallopeptidase 16.
      
 0.639
FOXP1
Forkhead box P1.
    
 
 0.637
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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