Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZIC1Zic family member 1. (488 aa)    
Predicted Functional Partners:
ZIC3
Zic family member 3.
   
    0.899
ZIC4
Zic family member 4.
   
  
 0.872
ZIC5
Zic family member 5.
   
  
 0.857
GABRA6
Gamma-aminobutyric acid type A receptor alpha6 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.630
FOXD3
Forkhead box D3.
   
 0.615
PAX5
Paired box 5.
    
 0.614
GRID2IP
Grid2 interacting protein.
    
 
 0.606
ASNS
Asparagine synthetase [glutamine-hydrolyzing].
    
 
 0.590
LHX8
LIM homeobox 8.
   
 0.561
TFAP2A
Transcription factor AP-2 alpha.
    
 0.536
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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