Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COLGALT1Collagen beta(1-O)galactosyltransferase 1. (545 aa)    
Predicted Functional Partners:
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
0.995
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
  
 
 
0.976
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
0.966
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
0.960
COL21A1
Collagen type XXI alpha 1 chain.
    
 0.829
COL23A1
Collagen type XXIII alpha 1 chain.
    
 0.765
RITA1
Uncharacterized protein.
    
   0.713
COL4A2
Collagen type IV alpha 2 chain.
    
 0.668
COL6A2
Collagen type VI alpha 2 chain.
   
 0.636
COL8A2
Collagen type VIII alpha 2 chain.
    
 0.625
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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