Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMO2LIM domain only 2. (222 aa)    
Predicted Functional Partners:
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 0.981
LDB1
LIM domain binding 1.
    
 0.966
GATA1
GATA binding protein 1.
    
 0.955
LDB2
LIM domain binding 2.
    
 0.951
GATA2
GATA binding protein 2.
    
 0.848
POLR2G
S1 domain-containing protein.
    
   0.796
MYB
MYB proto-oncogene, transcription factor.
    
 0.771
POLR2D
RNA polymerase II subunit D.
    
   0.765
TAL2
TAL bHLH transcription factor 2.
    
 0.760
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
   0.759
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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