Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBL7Ubiquitin like 7. (380 aa)    
Predicted Functional Partners:
UBE4B
Ubiquitination factor E4B.
   
 0.839
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
   
 0.816
SHKBP1
SH3KBP1 binding protein 1.
    
 0.815
PUS3
Pseudouridine synthase 3.
    
 
 0.814
UBB
Uncharacterized protein.
    
 0.797
XRCC6
Testis cDNA, clone: QtsA-19002, similar to human thyroid autoantigen 70kDa (Ku antigen) (G22P1).
    
 
 0.785
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.753
ITSN2
Intersectin 2.
    
 0.744
UBXN7
UBX domain protein 7.
    
 0.732
TNNT3
Troponin T3, fast skeletal type.
    
 
 0.715
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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