Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCLT1Sodium channel and clathrin linker 1. (688 aa)    
Predicted Functional Partners:
KIZ
Kizuna centrosomal protein.
    
  0.905
CEP83
Centrosomal protein 83.
   
 0.724
MTMR4
Myotubularin related protein 4.
    
  0.717
CEP19
Centrosomal protein 19.
      
 0.676
FBF1
Fas binding factor 1.
    
 0.665
C3orf14
Chromosome 3 open reading frame 14.
      
 0.659
CEP89
Centrosomal protein 89.
     
 0.642
TTBK2
Tau tubulin kinase 2; Belongs to the intermediate filament family.
    
 0.639
CEP128
Centrosomal protein 128.
    
 0.639
CEP350
Centrosomal protein 350.
    
 
 0.637
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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