Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FBXO45 | NCBP2 | ENSMFAP00000022735 | ENSMFAP00000008758 | F-box protein 45. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.748 |
FBXO45 | SENP5 | ENSMFAP00000022735 | ENSMFAP00000004684 | F-box protein 45. | Sentrin-specific protease 5; Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMO3 to its mature form and deconjugation of SUMO2 and SUMO3 from targeted proteins. Has weak proteolytic activity against full-length SUMO1 or SUMO1 conjugates. Required for cell division. | 0.680 |
FBXO45 | UBXN7 | ENSMFAP00000022735 | ENSMFAP00000032174 | F-box protein 45. | UBX domain protein 7. | 0.758 |
FBXO45 | WDR53 | ENSMFAP00000022735 | ENSMFAP00000002439 | F-box protein 45. | WD repeat domain 53. | 0.758 |
LAS1L | NOL9 | ENSMFAP00000043675 | ENSMFAP00000003705 | LAS1 like, ribosome biogenesis factor. | Nucleolar protein 9. | 0.987 |
LAS1L | PELP1 | ENSMFAP00000043675 | ENSMFAP00000006133 | LAS1 like, ribosome biogenesis factor. | Proline, glutamate and leucine rich protein 1. | 0.938 |
LAS1L | SENP5 | ENSMFAP00000043675 | ENSMFAP00000004684 | LAS1 like, ribosome biogenesis factor. | Sentrin-specific protease 5; Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMO3 to its mature form and deconjugation of SUMO2 and SUMO3 from targeted proteins. Has weak proteolytic activity against full-length SUMO1 or SUMO1 conjugates. Required for cell division. | 0.762 |
LAS1L | SENP6 | ENSMFAP00000043675 | ENSMFAP00000030356 | LAS1 like, ribosome biogenesis factor. | SUMO specific peptidase 6. | 0.453 |
LAS1L | TEX10 | ENSMFAP00000043675 | ENSMFAP00000033568 | LAS1 like, ribosome biogenesis factor. | Testis expressed 10. | 0.948 |
LAS1L | WDR18 | ENSMFAP00000043675 | ENSMFAP00000040728 | LAS1 like, ribosome biogenesis factor. | WD repeat domain 18. | 0.939 |
NCBP2 | FBXO45 | ENSMFAP00000008758 | ENSMFAP00000022735 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | F-box protein 45. | 0.748 |
NCBP2 | SENP5 | ENSMFAP00000008758 | ENSMFAP00000004684 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | Sentrin-specific protease 5; Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMO3 to its mature form and deconjugation of SUMO2 and SUMO3 from targeted proteins. Has weak proteolytic activity against full-length SUMO1 or SUMO1 conjugates. Required for cell division. | 0.720 |
NCBP2 | UBXN7 | ENSMFAP00000008758 | ENSMFAP00000032174 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | UBX domain protein 7. | 0.886 |
NCBP2 | WDR53 | ENSMFAP00000008758 | ENSMFAP00000002439 | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | WD repeat domain 53. | 0.810 |
NOL9 | LAS1L | ENSMFAP00000003705 | ENSMFAP00000043675 | Nucleolar protein 9. | LAS1 like, ribosome biogenesis factor. | 0.987 |
NOL9 | PELP1 | ENSMFAP00000003705 | ENSMFAP00000006133 | Nucleolar protein 9. | Proline, glutamate and leucine rich protein 1. | 0.877 |
NOL9 | SENP5 | ENSMFAP00000003705 | ENSMFAP00000004684 | Nucleolar protein 9. | Sentrin-specific protease 5; Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMO3 to its mature form and deconjugation of SUMO2 and SUMO3 from targeted proteins. Has weak proteolytic activity against full-length SUMO1 or SUMO1 conjugates. Required for cell division. | 0.641 |
NOL9 | SENP6 | ENSMFAP00000003705 | ENSMFAP00000030356 | Nucleolar protein 9. | SUMO specific peptidase 6. | 0.474 |
NOL9 | TEX10 | ENSMFAP00000003705 | ENSMFAP00000033568 | Nucleolar protein 9. | Testis expressed 10. | 0.942 |
NOL9 | WDR18 | ENSMFAP00000003705 | ENSMFAP00000040728 | Nucleolar protein 9. | WD repeat domain 18. | 0.982 |
page 1 of 3