STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3FSemaphorin 3F; Belongs to the semaphorin family. (785 aa)    
Predicted Functional Partners:
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.966
NRP2
Neuropilin; Belongs to the neuropilin family.
    
 
 0.839
PLXNA1
Plexin A1.
   
 0.822
PLXNA3
Plexin A3.
   
 0.779
PLXND1
Uncharacterized protein.
   
 0.733
NPRL2
NPR2 like, GATOR1 complex subunit.
      
 0.690
RASSF1
Ras association domain family member 1.
      
 0.687
PLXNC1
Plexin C1.
   
 0.658
PBRM1
Polybromo 1.
      
 0.635
EFNA5
Ephrin A5; Belongs to the ephrin family.
      
 0.620
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.