Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
VAMP1Vesicle associated membrane protein 1. (118 aa)    
Predicted Functional Partners:
VAMP3
Vesicle-associated membrane protein 3; SNARE involved in vesicular transport from the late endosomes to the trans-Golgi network.
  
0.998
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
  
 
0.996
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.991
STX1A
Syntaxin 1A; Belongs to the syntaxin family.
   
 0.989
STX3
Syntaxin 3; Belongs to the syntaxin family.
   
 0.980
STX1B
Syntaxin 1B; Belongs to the syntaxin family.
   
 0.980
STX4
Syntaxin 4; Belongs to the syntaxin family.
   
 0.976
STX2
Syntaxin 2; Belongs to the syntaxin family.
   
 0.973
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.955
SYT2
Synaptotagmin 2.
   
 0.920
Your Current Organism:
Macaca fascicularis
NCBI taxonomy Id: 9541
Other names: M. fascicularis, Macaca cynomolgus, Macaca irus, crab eating macaque, crab-eating macaque, cynomolgus macaque, cynomolgus monkey, cynomolgus monkeys, long-tailed macaque
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